Publicaciones del Centro

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PUBLICACIONES DEL CENTRO

2021

    1. Baden, L. R., El Sahly, H. M., Essink, B., Kotloff, K., Frey, S., Novak, R., Diemert, D., Spector, S. A., Rouphael, N., Creech, C. B., McGettigan, J., Khetan, S., Segall, N., Solis, J., Brosz, A., Fierro, C., Schwartz, H., Neuzil, K., Corey, L., Gilbert, P., Janes, H., Follmann, D., Marovich, M., Mascola, J., Polakowski, L., Ledgerwood, J., Graham, B. S., Bennett, H., Pajon, R., Knightly, C., Leav, B., Deng, W., Zhou, H., Han, S., Ivarsson, M., Miller, J., and Zaks, T. 2021. Efficacy and Safety of the mRNA-1273 SARS-CoV-2 Vaccine. N. Engl. J. Med. 384:403–416 [Article]
    2. Bekta?, A., Covington, M. F., Aidelberg, G., Arce, A., Matute, T., Núñez, I., Walsh, J., Boutboul, D., Delaugerre, C., Lindner, A. B., Federici, F., and Jayaprakash, A. D. 2021. Accessible LAMP-Enabled Rapid Test (ALERT) for Detecting SARS-CoV-2. Viruses. 13 [Article]
    3. Giroud, S., Habold, C., Nespolo, R. F., Mejías, C., Terrien, J., Logan, S. M., Henning, R. H., and Storey, K. B. 2020. The Torpid State: Recent Advances in Metabolic Adaptations and Protective  Mechanisms(†). Physiol. 11:623665 [Article]
    4. Herrera-Vásquez, A., Fonseca, A., Ugalde, J. M., Lamig, L., Seguel, A., Moyano, T. C., Gutiérrez, R. A., Salinas, P., Vidal, E. A., and Holuigue, L. 2021. TGA class II transcription factors are essential to restrict oxidative stress in  response to UV-B stress in Arabidopsis. Exp. Bot. 72:1891–1905 [Article]
    5. Mardones, W., Villarroel, C. A., Abarca, V., Urbina, K., Peña, T. A., Molinet, J., Nespolo, R. F., and Cubillos, F. A. 2021. Rapid selection response to ethanol in Saccharomyces eubayanus emulates the  domestication process under brewing conditions. Microb. Biotechnol.  [Article]
    6. Moison, M., Pacheco, J. M., Lucero, L., Fonouni-Farde, C., Rodríguez-Melo, J., Mansilla, N., Christ, A., Bazin, J., Benhamed, M., Ibañez, F., Crespi, M., Estevez, J. M., and Ariel, F. 2021. The lncRNA APOLO interacts with the transcription factor WRKY42 to trigger root hair  cell expansion in response to cold. Mol. Plant. [Article]
    7. Muñoz-Guzmán, F., Caballero, V., and Larrondo, L. F. 2021. A Global Search for novel Transcription Factors impacting the Neurospora crassa  Circadian Clock. G3 (Bethesda). [Article]
    8. Olanrewaju, C. A., Ramirez, C. E., and Fernandez-Lima, F. 2021. Comprehensive Screening of Polycyclic Aromatic Hydrocarbons and Similar Compounds  Using GC-APLI-TIMS-TOFMS/GC-EI-MS. Anal. Chem. 93:6080–6087  [Article]
    9. Ötvös, K., Marconi, M., Vega, A., O’Brien, J., Johnson, A., Abualia, R., Antonielli, L., Montesinos, J. C., Zhang, Y., Tan, S., Cuesta, C., Artner, C., Bouguyon, E., Gojon, A., Friml, J., Gutiérrez, R. A., Wabnik, K., and Benková, E. 2021. Modulation of plant root growth by nitrogen source-defined regulation of polar auxin  transport. EMBO J.   40:e106862  [Article]
    10. Pacheco, J. M., Mansilla, N., Moison, M., Lucero, L., Gabarain, V. B., Ariel, F., and Estevez, J. M. 2021. The lncRNA APOLO and the transcription factor WRKY42 target common cell wall  EXTENSIN encoding genes to trigger root hair cell elongation. Plant Signal. Behav. :1920191 [Article]
    11. Pérez-Giménez, J., Iturralde, E. T., Torres Tejerizo, G., Quelas, J. I., Krol, E., Borassi, C., Becker, A., Estevez, J. M., and Lodeiro, A. R. 2021. A Stringent-Response-Defective Bradyrhizobium diazoefficiens Strain Does Not  Activate the Type 3 Secretion System, Elicits an Early Plant Defense Response, and Circumvents NH(4)NO(3)-Induced Inhibition of Nodulation. Appl. Environ. Microbiol. 87 [Article]
    12. Ruffel, S., Chaput, V., Przybyla-Toscano, J., Fayos, I., Ibarra, C., Moyano, T., Fizames, C., Tillard, P., O’Brien, J. A., Gutiérrez, R. A., Gojon, A., and Lejay, L. 2021. Genome-wide analysis in response to nitrogen and carbon identifies regulators for  root AtNRT2 transporters. Plant Physiol.  [Article]
    13. Strasser, R., Seifert, G., Doblin, M. S., Johnson, K. L., Ruprecht, C., Pfrengle, F., Bacic, A., and Estevez, J. M. 2021. Cracking the “Sugar Code”: A Snapshot of N- and O-Glycosylation Pathways and  Functions in Plants Cells. Front. Plant Sci. 12:640919 [Article]
    14. Yáñez Feliú, G., Earle Gómez, B., Codoceo Berrocal, V., Muñoz Silva, M., Nuñez, I. N., Matute, T. F., Arce Medina, A., Vidal, G., Vidal Céspedes, C., Dahlin, J., Federici, F., and Rudge, T. J. 2021. Flapjack: Data Management and Analysis for Genetic Circuit Characterization. ACS Synth. Biol. 10:183–191  [Article]
    15. Zúñiga, L. M., Andrade, J., Fábrega-Guerén, F., Orihuela, P. A., Velasquez, E. V, Vidal, E. A., Gutiérrez, R. A., Morales, P., Gómez-Silva, B., and Croxatto, H. B. Mating induces early transcriptional response in the rat endosalpinx: The role of TNF and RA. :REP-20-0190  [Article]

2020

  1. Rojas V., Salinas F., Guzman-Zamora L., Romero A., Delgado V., Larrondo L. F. 12 Exploiting Fungal Photobiology as a Source of Novel Bio-blocks for Optogenetic Systems. in: Benz J.P., Schipper K. (eds) Genetics and Biotechnology. The Mycota (A Comprehensive Treatise on Fungi as Experimental Systems for Basic and Applied Research) [Article]
  2. Borassi, C., Gloazzo Dorosz, J., Ricardi, M. M., Carignani Sardoy, M., Pol Fachin, L., Marzol, E., Mangano, S., Rodríguez Garcia, D. R., Martínez Pacheco, J., Rondón Guerrero, Y. del C., Velasquez, S. M., Villavicencio, B., Ciancia, M., Seifert, G., Verli, H., and Estevez, J. M. 2020. A cell surface arabinogalactan-peptide influences root hair cell fate. New Phytol. 227:732–743  [Article]
  3. Díaz, R. D., and Larrondo, L. F. A circadian clock in Neurospora crassa functions during plant cell wall  deconstruction. Fungal Biol. 124:501–508  [Article]
  4. Wozniak, A., Cerda, A., Ibarra-Henríquez, C., Sebastian, V., Armijo, G., Lamig, L., Miranda, C., Lagos, M., Solari, S., Guzmán, A. M., Quiroga, T., Hitschfeld, S., Riveras, E., Ferrés, M., Gutiérrez, R. A.,and García, P. 2020. A simple RNA preparation method for SARS-CoV-2 detection by RT-qPCR. Rep. 10:16608  [Article]
  5. Nespolo, R. F., Villarroel, C. A., Oporto, C. I., Tapia, S. M., Vega-Macaya, F., Urbina, K., De Chiara, M., Mozzachiodi, S., Mikhalev, E., Thompson, D., Larrondo, L. F., Saenz-Agudelo, P., Liti, G., and Cubillos, F. A. 2020. An Out-of-Patagonia migration explains the worldwide diversity and distribution of  Saccharomyces eubayanus lineages. PLoS Genet. 16:e1008777   [Article]
  6. Li, L., Li, B., Xie, C., Zhang, T., Borassi, C., Estevez, J. M.,Li, X., and Liu, X. 2020. Arabidopsis RAD23B regulates pollen development by mediating degradation of KRP1. J. Exp. Bot. 71:4010–4019  [Article]
  7. Zhu, S., Martínez Pacheco, J., Estevez, J. M., and Yu, F. 2020. Autocrine regulation of root hair size by the RALF-FERONIA-RSL4 signaling pathway. New Phytol. 227:45–49  [Article]
  8. Villalobos-Cid, M., Salinas, F., Kessi-Pérez, E. I., De Chiara, M., Liti, G., Inostroza-Ponta, M., and Martínez, C. 2020. Comparison of phylogenetic tree topologies for nitrogen associated genes partially reconstruct the evolutionary history of saccharomyces cerevisiae. Microorganisms.  [Article]
  9. Brooks, M. D., Juang, C.-L., Katari, M. S., Alvarez, J. M., Pasquino, A., Shih, H.-J., Huang, J., Shanks, C., Cirrone, J., and Coruzzi, G. M. 2020. ConnecTF: A platform to integrate transcription factor-gene interactions and validate regulatory networks. Plant Physiol. [Article]
  10. Pérez-Palma, E., Bustos, B. I., Lal, D., Buch, S., Azocar, L., Toliat, M. R., Lieb, W., Franke, A., Hinz, S., Burmeister, G., von Shönfels, W., Schafmayer, C., Ahnert, P., Völzke, H., Völker, U., Homuth, G., Lerch, M. M., Puschel, K., Gutiérrez, R. A., Hampe, J., Nürnberg, P., Miquel, J. F., and De Ferrari, G. V. 2020. Copy number variants in lipid metabolism genes are associated with gallstones  disease in men. Eur. J. Hum. Genet. 28:264–273 [Article]
  11. Vasquez-Montaño, E., Hoppe, G., Vega, A., Olivares-Yañez, C., and Canessa, P. Defects in the Ferroxidase That Participates in the Reductive Iron Assimilation  System Results in Hypervirulence in Botrytis Cinerea. MBio. 11  [Article]
  12. Kessi-Pérez, E. I., Ponce, B., Li, J., Molinet, J., Baeza, C., Figueroa, D., Bastías, C., Gaete, M., Liti, G., Díaz-Barrera, A., Salinas, F., and Martínez, C. 2020. Differential Gene Expression and Allele Frequency Changes Favour Adaptation of a  Heterogeneous Yeast Population to Nitrogen-Limited Fermentations. Front. Microbiol. 11:1204  [Article]
  13. Guajardo, L.; Aguilar, R.; Bustos, F.J.; Nardocci, G.; Gutiérrez, R.A.; van Zundert, B.; Montecino, M. 2020. Downregulation of the Polycomb-Associated Methyltransferase Ezh2 during Maturation of Hippocampal Neurons Is Mediated by MicroRNAs Let-7 and miR-124. J. Mol. Sci. 21 [Article]
  14. Mandakovic, D., Pulgar, R., Maldonado, J., Mardones, W., González, M., Cubillos, F. A., and Cambiazo, V. 2020. Fungal Diversity Analysis of Grape Musts from Central Valley-Chile and  Characterization of Potential New Starter Cultures.   [Article]
  15. Barrera, A., Hereme, R., Ruiz-Lara, S., Larrondo, L. F., Gundel, P. E., Pollmann, S., Molina-Montenegro, M. A., and Ramos, P. 2020. Fungal Endophytes Enhance the Photoprotective Mechanisms and Photochemical Efficiency in the Antarctic Colobanthus quitensis (Kunth) Bartl. Exposed to UV-B Radiation. Front. Ecol. Evol.   [Article]
  16. Faktorová, D., Nisbet, R. E. R., Fernández Robledo, J. A., Casacuberta, E., Sudek, L., Allen, A. E., Ares, M. J., Aresté, C., Balestreri, C., Barbrook, A. C., Beardslee, P., Bender, S., Booth, D. S., Bouget, F.-Y., Bowler, C., Breglia, S. A., Brownlee, C., Burger, G., Cerutti, H., Cesaroni, R., Chiurillo, M. A., Clemente, T., Coles, D. B., Collier, J. L., Cooney, E. C., Coyne, K., Docampo, R., Dupont, C. L., Edgcomb, V., Einarsson, E., Elustondo, P. A., Federici, F., Freire-Beneitez, V., Freyria, N. J., Fukuda, K., García, P. A., Girguis, P. R., Gomaa, F., Gornik, S. G., Guo, J., Hampl, V., Hanawa, Y., Haro-Contreras, E. R., Hehenberger, E., Highfield, A., Hirakawa, Y., Hopes, A., Howe, C. J., Hu, I., Ibañez, J., Irwin, N. A. T., Ishii, Y., Janowicz, N. E., Jones, A. C., Kachale, A., Fujimura-Kamada, K., Kaur, B., Kaye, J. Z., Kazana, E., Keeling, P. J., King, N., Klobutcher, L. A., Lander, N., Lassadi, I., Li, Z., Lin, S., Lozano, J.-C., Luan, F., Maruyama, S., Matute, T., Miceli, C., Minagawa, J., Moosburner, M., Najle, S. R., Nanjappa, D., Nimmo, I. C., Noble, L., Novák Vanclová, A. M. G., Nowacki, M., Nuñez, I., Pain, A., Piersanti, A., Pucciarelli, S., Pyrih, J., Rest, J. S., Rius, M., Robertson, D., Ruaud, A., Ruiz-Trillo, I., Sigg, M. A., Silver, P. A., Slamovits, C. H., Jason Smith, G., Sprecher, B. N., Stern, R., Swart, E. C., Tsaousis, A. D., Tsypin, L., Turkewitz, A., Turnšek, J., Valach, M., Vergé, V., von Dassow, P., von der Haar, T., Waller, R. F., Wang, L., Wen, X., Wheeler, G., Woods, A., Zhang, H., Mock, T., Worden, A. Z., and Lukeš, J. 2020. Genetic tool development in marine protists: emerging model organisms for  experimental cell biology. Nat. Methods. 17:481–494   [Article]
  17. Molinet, J., Salinas, F., Guillamón, J. M., and Martínez, C. 2020. GTR1 Affects Nitrogen Consumption and TORC1 Activity in Saccharomyces cerevisiae  Under Fermentation Conditions. Front. Genet. 11:519   [Article]
  18. Sede, A. R., Wengier, D. L., Borassi, C., Estevez, J. M., and Muschietti, J. P. 2020. Imaging and Analysis of the Content of Callose, Pectin, and Cellulose in the Cell Wall of Arabidopsis Pollen Tubes Grown In Vitro BT  – Pollen and Pollen Tube Biology: Methods and Protocols. Pages 233–242 in: A. Geitmann, ed. Springer US, New York, NY.   [Article]
  19. Silva-Sanzana, C., Estevez, J. M., and Blanco-Herrera, F. 2020. Influence of cell wall polymers and their modifying enzymes during plant–aphid interactions. J. Exp. Bot. 71:3854–3864   [Article]
  20. Libkind, D., Peris, D., Cubillos, F. A., Steenwyk, J. L., Opulente, D. A., Langdon, Q. K., Rokas, A., and Hittinger, C. T. 2020. Into the wild: new yeast genomes from natural environments and new tools for their  analysis. FEMS Yeast Res. 20   [Article]
  21. Medina, E., Villalobos, P., Hamilton, G. L., Komives, E. A., Sanabria, H., Ramírez-Sarmiento, C. A., and Babul, J. 2020. Intrinsically Disordered Regions of the DNA-Binding Domain of Human FoxP1 Facilitate  Domain Swapping. J. Mol. Biol. 432:5411–5429  [Article]
  22. Zúñiga, L. M., Andrade, J., Fábrega-Guerén, F., Orihuela, P. A., Velasquez, E. V, Vidal, E. A., Gutiérrez, R. A., Morales, P., Gómez-Silva, B., and Croxatto, H. B. Mating induces early transcriptional response in the rat endosalpinx: The role of TNF and RA. Reproduction. :REP-20-0190   [Article]
  23. Mardones, W., Villarroel, C. A., Krogerus, K., Tapia, S. M., Urbina, K., Oporto, C. I., O’Donnell, S., Minebois, R., Nespolo, R., Fischer, G., Querol, A., Gibson, B., and Cubillos, F. A. Molecular profiling of beer wort fermentation diversity across natural Saccharomyces  eubayanus isolates. Microb. Biotechnol. 13:1012–1025   [Article]
  24. Moreno, S., Canales, J., Hong, L., Robinson, D., Roeder, A. H. K., and Gutiérrez, R. A. Nitrate Defines Shoot Size through Compensatory Roles for Endoreplication and Cell  Division in Arabidopsis thaliana. Curr. Biol. 30:1988-2000.e3   [Article]
  25. Vidal, E. A., Alvarez, J. M., Araus, V., Riveras, E., Brooks, M. D., Krouk, G., Ruffel, S., Lejay, L., Crawford, N. M., Coruzzi, G. M., and Gutiérrez, R. A. Nitrate in 2020: Thirty Years from Transport to Signaling Networks. Plant Cell. 32:2094–2119  [Article]
  26. Naulin, P. A., Armijo, G. I., Vega, A. S., Tamayo, K. P., Gras, D. E., de la Cruz, J., and Gutiérrez, R. A. Nitrate Induction of Primary Root Growth Requires Cytokinin Signaling in Arabidopsis  thaliana. Plant Cell Physiol. 61:342–352   [Article]
  27. Swift, J., Alvarez, J. M., Araus, V., Gutiérrez, R. A., and Coruzzi, G. M. 2020. Nutrient dose-responsive transcriptome changes driven by Michaelis-Menten kinetics  underlie plant growth rates. Natl. Acad. Sci. U. S. A. 117:12531–12540     [Article]
  28.  Nespolo, R. F., Solano-Iguaran, J. J., Paleo-López, R., Quintero-Galvis, J. F., Cubillos, F., and Bozinovic, F. 2020.   Performance, genomic rearrangements, and signatures of adaptive evolution: Lessons  from fermentative yeasts. Ecol. Evol. 10:5240–5250  [Article]
  29. Carrasco-Puga, G., Díaz, F. P., Soto, D. C., Hernández-Castro, C., Contreras-López, O., Maldonado, A., Latorre, C., and Gutiérrez, R. A. Revealing hidden plant diversity in arid environments. Ecography (Cop.). n/a   [Article]
  30. Leiva-Ampuero, A., Agurto, M., Matus, J. T., Hoppe, G., Huidobro, C., Inostroza-Blancheteau, C., Reyes-Díaz, M., Stange, C., Canessa, P., and Vega, A. 2020. Salinity impairs photosynthetic capacity and enhances carotenoid-related gene  expression and biosynthesis in tomato (Solanum lycopersicum L. cv. Micro-Tom). PeerJ. 8:e9742 [Article]
  31. Rezende, E. L., Bacigalupe, L. D., Nespolo, R. F., and Bozinovic, F. 2020. Shrinking dinosaurs and the evolution of endothermy in birds. Adv. 6:eaaw4486   [Article]
  32. Herrera-Vásquez, A., Fonseca, A., Ugalde, J. M., Lamig, L., Seguel, A., Moyano, T. C., Gutiérrez, R. A., Salinas, P., Vidal, E. A., and Holuigue, L. 2020. TGA class II transcription factors are essential to restrict oxidative stress in response to UV-B stress in Arabidopsis. Exp. Bot.   [Article]
  33. Domínguez-Figueroa, J., Carrillo, L., Renau-Morata, B., Yang, L., Molina, R.-V., Marino, D., Canales, J., Weih, M., Vicente-Carbajosa, J., Nebauer, S. G., and Medina, J. 2020. The Arabidopsis Transcription Factor CDF3 Is Involved in Nitrogen Responses and Improves Nitrogen Use Efficiency in Tomato. Front. Plant Sci.  . 11:1825   [Article]
  34. Figueroa, D., Rojas, V., Romero, A.,Larrondo, L. F., and Salinas, 2020. The rise and shine of yeast optogenetics. Yeast. n/a   [Article
  35. Villalobos-Cid, M., Salinas, F., and Inostroza-Ponta, M. 2020. Total evidence or taxonomic congruence? A comparison of methods for combining biological evidence. J. Bioinform. Biol. 18:2050040   [Article]
  36. Devia, J., Bastías, C., Kessi-Pérez, E. I., Villarroel, C. A., De Chiara, M., Cubillos, F. A., Liti, G., Martínez, C., and Salinas, F. Transcriptional Activity and Protein Levels of Horizontally Acquired Genes in Yeast  Reveal Hallmarks of Adaptation to Fermentative Environments. Front. Genet. 11:293  [Article]
  37. Canales, J., Uribe, F., Henríquez-Valencia, C., Lovazzano, C., Medina, J., and Vidal, E. A. Transcriptomic analysis at organ and time scale reveals gene regulatory networks  controlling the sulfate starvation response of Solanum lycopersicum. BMC Plant Biol. 20:385  [Article]
  38. Riveras, E., Azocar, L., Moyano, T. C., Ocares, M., Molina, H., Romero, D., Roa, J. C., Valbuena, J. R., Gutiérrez, R. A., and Miquel, J. F. 2020. Transcriptomic profiles reveal differences in zinc metabolism, inflammation, and tight junction proteins in duodenum from cholesterol gallstone subjects. Sci. Rep. 10:7448 [Article]
  39. Pollak, B., Matute, T., Nuñez, I., Cerda, A., Lopez, C., Vargas, V., Kan, A., Bielinski, V., von Dassow, P., Dupont, C. L., and Federici, F. Universal loop assembly: open, efficient and cross-kingdom DNA fabrication. Synth. Biol. (Oxford, England). 5:ysaa001 [Article]
  40. Urbina, K., Villarreal, P., Nespolo, R. F., Salazar, R., Santander, R., and Cubillos, F. A. Volatile Compound Screening Using HS-SPME-GC/MS on Saccharomyces eubayanus Strains  under Low-Temperature Pilsner Wort Fermentation. Microorganisms. 8  [Article]
  41. Molinet, J., and Cubillos, F. A. Wild Yeast for the Future: Exploring the Use of Wild Strains for Wine and Beer Fermentation. Front. Genet.  . 11:1281   [Article]

 

2019

 

  1. Nuñez-Lillo, G., Balladares, C., Pavez, C., Urra, C., Sanhueza, D., Vendramin, E., Dettori, M. T., Arús, P., Verde, I., Blanco-Herrera, F., Campos-Vargas, R., and Meneses, C. 2019. High-density genetic map and QTL analysis of soluble solid content, maturity date, and mealiness in peach using genotyping by sequencing. Sci. Hortic. (Amsterdam). 257:108734 [Article]
  2. Oporto, C. I., Villarroel, C. A., Tapia, S. M., Garcia, V., and Cubillos, F. A. 2019. Distinct Transcriptional Changes in Response to Patulin Underlie Toxin Biosorption Differences in Saccharomyces Cerevisiae. Toxins (Basel). 11 [Article]
  3. Molinet, J., Cubillos, F. A., Salinas, F., Liti, G., and Martinez, C. 2019. Genetic variants of TORC1 signaling pathway affect nitrogen consumption in Saccharomyces cerevisiae during alcoholic fermentation. PLoS One. 14:e0220515 [Article]
  4. Kessi-Perez, E. I., Salinas, F., Gonzalez, A., Su, Y., Guillamon, J. M., Hall, M. N., Larrondo, L. F., and Martinez, C. 2019. KAE1 Allelic Variants Affect TORC1 Activation and Fermentation Kinetics in Saccharomyces cerevisiae. Front. Microbiol. 10:1686 [Article]
  5. Alvarez, J. M., Moyano, T. C., Zhang, T., Gras, D. E., Herrera, F. J., Araus, V., O’Brien, J. A., Carrillo, L., Medina, J., Vicente-Carbajosa, J., Jiang, J., and Gutiérrez, R. A. 2019. Local changes in chromatin accessibility and transcriptional networks underlying the nitrate response in Arabidopsis roots. Mol. Plant. [Article]
  6. Pérez-Palma, E., Bustos, B. I., Lal, D., Buch, S., Azocar, L., Toliat, M. R., Lieb, W., Franke, A., Hinz, S., Burmeister, G., von Shönfels, W., Schafmayer, C., Ahnert, P., Völzke, H., Völker, U., Homuth, G., Lerch, M. M., Puschel, K.,Gutiérrez, R. A.,Hampe, J., Nürnberg, P., Francisco Miquel, J., and De Ferrari, G. V. 2019. Copy number variants in lipid metabolism genes are associated with gallstones disease in men. Eur. J. Hum. Genet. [Article]
  7. Naulin PA, Armijo G, Vega A, Tamayo KP, Gras DE, de la Cruz J, and Gutiérrez, R. A.(2019) Nitrate induction of primary root growth requires cytokinin signaling in Arabidopsis thaliana. Plant Cell Phys. Accepted. [Article]
  8. Wood JR, Díaz FP, Latorre C, Wilmshurst JM, Burge OR, Gutiérrez RA(2019). Ancient parasite DNA from late Quaternary Atacama Desert rodent middens. Quat. Sci Rev. Accepted. [Article]
  9. Pollak, B., Cerda, A., Delmans, M., Alamos, S., Moyano, T., West, A., Gutierrez, R. A.,Patron, N. J., Federici, F.,and Haseloff, J. 2019. Loop assembly: a simple and open system for recursive fabrication of DNA circuits. New Phytol. 222:628–640 [Article]Nuñez-Lillo, G., Balladares, C., Pavez, C., Urra, C., Sanhueza, D., Vendramin, E., Dettori, M. T., Arús, P., Verde, I., Blanco-Herrera, F., Campos-Vargas, R., and Meneses, C. 2019. High-density genetic map and QTL analysis of soluble solid content, maturity date, and mealiness in peach using genotyping by sequencing. Sci. Hortic. (Amsterdam). 257:108734 [Article]
  10. Bustos, B. I., Perez-Palma, E., Buch, S., Azocar, L., Riveras, E., Ugarte, G. D., Toliat, M., Nurnberg, P., Lieb, W., Franke, A., Hinz, S., Burmeister, G., von Schonfels, W., Schafmayer, C., Volzke, H., Volker, U., Homuth, G., Lerch, M. M., Santos, J. L., Puschel, K., Bambs, C., Roa, J. C., Gutierrez, R. A.,Hampe, J., De Ferrari, G. V, and Miquel, J. F. 2019. Variants in ABCG8 and TRAF3 genes confer risk for gallstone disease in admixed Latinos with Mapuche Native American ancestry. Sci. Rep. 9:772 [Article]
  11. Fernandez-Gomez, B., Maldonado, J., Mandakovic, D., Gaete, A., Gutierrez, R. A., Maass, A., Cambiazo, V., and Gonzalez, M. 2019. Bacterial communities associated to Chilean altiplanic native plants from the Andean grasslands soils. Sci. Rep. 9:1042 [Article]
  12. Diaz, F. P., Latorre, C., Carrasco-Puga, G., Wood, J. R., Wilmshurst, J. M., Soto, D. C., Cole, T. L., and Gutierrez, R. A. 2019. Multiscale climate change impacts on plant diversity in the Atacama Desert. Glob. Chang. Biol. 25:1733–1745 [Article]
  13. Vidal, E. A., Moyano, T. C., Bustos, B. I., Perez-Palma, E., Moraga, C., Riveras, E., Montecinos, A., Azocar, L., Soto, D. C., Vidal, M., Di Genova, A., Puschel, K., Nurnberg, P., Buch, S., Hampe, J., Allende, M. L., Cambiazo, V., Gonzalez, M., Hodar, C., Montecino, M., Munoz-Espinoza, C., Orellana, A., Reyes-Jara, A., Travisany, D., Vizoso, P., Moraga, M., Eyheramendy, S., Maass, A., De Ferrari, G. V, Miquel, J. F., and Gutierrez, R. A.  2019. Whole Genome Sequence, Variant Discovery and Annotation in Mapuche-Huilliche Native South Americans. Sci. Rep. 9:2132[Article]
  14. Brooks, M. D., Cirrone, J., Pasquino, A. V, Alvarez, J. M., Swift, J., Mittal, S., Juang, C.-L., Varala, K., Gutierrez, R. A., Krouk, G., Shasha, D., and Coruzzi, G. M. 2019. Network Walking charts transcriptional dynamics of nitrogen signaling by integrating validated and predicted genome-wide interactions. Nat. Commun. 10:1569 [Article]
  15. Cubillos, F. A., Gibson, B., Grijalva-Vallejos, N., Krogerus, K., and Nikulin, J. 2019. Bioprospecting for brewers: Exploiting natural diversity for naturally diverse beers. Yeast. [Article]
  16. Falter-Braun, P., Brady, S., Gutierrez, R. A., Coruzzi, G. M., and Krouk, G. 2019. iPlant Systems Biology (iPSB): An International Network Hub in the Plant Community. Mol. Plant. 12:727–730 [Article]
  17. Ramírez-Cáceres, G. E., Moya-Hernández, M. G., Quilodrán, M., Nespolo, R. F., Ceballos, R., Villagra, C. A., and Ramírez, C. C. 2019. Harbouring the secondary endosymbiont Regiella insecticola increases predation risk and reproduction in the cereal aphid Sitobion avenae. J. Pest Sci. (2004). 92:1039–1047 [Article]
  18. Salazar, M. P., Valenzuela, D., Tironi, M., and Gutiérrez, R. A. 2019. The ambivalent regulator: the construction of a regulatory style for genetically modified crops in Chile. Tapuya Lat. Am. Sci. Technol. Soc. 0:1–21 [Article]
  19. Silva-Sanzana, C., Celiz-Balboa, J., Garzo, E., Marcus, S. E., Parra-Rojas, J. P., Rojas, B., Olmedo, P., Rubilar Romero, M. A., Rios, I., Chorbadjian, R. A., Fereres, A., Knox, J. P., Saez-Aguayo, S., and Blanco-Herrera, F. 2019. Pectinmethyesterases Modulate Plant Homogalacturonan Status in Defenses Against the Aphid Myzus persicae. Plant Cell. [Article]
  20. Mujica MI, Bueno CG, Duchicela J, Marín C. Strengthening mycorrhizal research in South America. New Phytol. 2019 Oct;224(2):563-567. doi: 10.1111/nph.16105. Epub 2019 Sep 10. PMID: 31503344.  [Article]

 

2018

 

  1. Wood, J. R., Diaz, F. P., Latorre, C., Wilmshurst, J. M., Burge, O. R., and Gutierrez, R. A. 2018. Plant pathogen responses to Late Pleistocene and Holocene climate change in the central Atacama Desert, Chile. Sci. Rep. 8:17208 [Article]
  2. Khan, A., Montenegro-Montero, A.,and Mathelier, A. 2018. Put science first and formatting later. EMBO Rep. 19 [Article]
  3. Castillo, F. M., Canales, J.,Claude, A., and Calderini, D. F. 2018. Expansin genes expression in growing ovaries and grains of sunflower are tissue-specific and associate with final grain weight. BMC Plant Biol. 18:327 [Article]
  4. Canales, J.,Henriquez-Valencia, C., and Brauchi, S. 2017. The Integration of Electrical Signals Originating in the Root of Vascular Plants. Front. Plant Sci. 8:2173 [Article]
  5. Arraño-Salinas, P., Domínguez-Figueroa, J., Herrera-Vásquez, A., Zavala, D., Medina, J., Vicente-Carbajosa, J., Meneses, C., Canessa, P., Moreno, A. A., and Blanco-Herrera, F. 2018. WRKY7, -11 and -17 transcription factors are modulators of the bZIP28 branch of the unfolded protein response during PAMP-triggered immunity in Arabidopsis thaliana. Plant Sci. :0–1 [Article]
  6. Brice C, Cubillos FA, Dequin S, Camarasa C, Martínez C 2018. Adaptability of the Saccharomyces cerevisiaeyeasts to wine fermentation conditions relies on their strong ability to consume nitrogen. PLoS2018 Feb 12;13(2):e0192383. doi: 10.1371/journal.pone.0192383. eCollection 2018.[Pubmed]
  7. Boni, A. C., Ambrósio, D. L., Cupertino, F. B., Montenegro-Montero, A., Virgilio, S., Freitas, F. Z., Corrocher, F. A., Gonçalves, R. D., Yang, A., Weirauch, M. T., Hughes, T. R., Larrondo, L. F., and Bertolini, M. C. 2018. Neurospora crassa developmental control mediated by the FLB-3 transcription factor. Fungal Biol. 122:570–582  [Article]
  8. Canales, J., Henriquez-Valencia, C., and Brauchi, S. 2018. The Integration of Electrical Signals Originating in the Root of Vascular Plants. Front. Plant Sci. 8  [Article]
  9. Cifuentes-Esquivel, N., Celiz-Balboa, J., Henriquez-Valencia, C., Mitina, I., Arraño-Salinas, P., Moreno, A. A., Meneses, C., Blanco-Herrera, F., and Orellana, A. 2018. bZIP17 regulates the expression of genes related to seed storage and germination, reducing seed susceptibility to osmotic stress. J. Cell. Biochem. 119:6857–6868  [Article]
  10. Contreras-López, O., Moyano, T. C., Soto, D. C., and Gutiérrez, R. A. 2018. Step-by-step construction of gene co-expression networks from high-throughput Arabidopsis RNA sequencing data. Methods Mol. Biol. 1761:275–301  [Article]
  11. Henríquez-Valencia, C., Arenas-M, A., Medina, J., and Canales, J. 2018. Integrative Transcriptomic Analysis Uncovers Novel Gene Modules That Underlie the Sulfate Response in Arabidopsis thaliana. Front. Plant Sci. 9:1–20  [Article]
  12. Kan, A., Del Valle, I., Rudge, T., Federici, F., and Haseloff, J. 2018. Intercellular adhesion promotes clonal mixing in growing bacterial populations. J. R. Soc. Interface. 15:20180406  [Article]
  13. Kessi-Pérez, E. I., Salinas, F., Molinet, J., González, A., Muñiz, S., Guillamón, J. M., Hall, M. N., Larrondo, L. F., and Martínez, C. 2018. Indirect monitoring of TORC1 signalling pathway reveals molecular diversity among different yeast strains. Yeast.  [Article]
  14. Larrondo, L., and Canessa, P. 2018. The Clock Keeps on Ticking: Emerging Roles for Circadian Regulation in the Control of Fungal Physiology and Pathogenesis Luis. in: Current Topics in Microbiology and Immunology,  [Article]
  15. Mandakovic, D., Rojas, C., Maldonado, J., Latorre, M., Travisany, D., Delage, E., Bihouée, A., Jean, G.,  Díaz, F. P.,  Fernández-Gómez, B., Cabrera, P., Gaete, A., Latorre, C.,  Gutiérrez, R. A., Maass, A.,  Cambiazo, V.,  Navarrete, S. A.,  Eveillard, D.,  González, M. 2018. Structure and co-occurrence patterns in microbial communities under acute environmental stress reveal ecological factors fostering resilience. Sci. Rep. 8:5875  [Article]
  16. Muñoz-Llanos, M., García-Pérez, M. A., Xu, X., Tejos-Bravo, M., Vidal, E. A., Moyano, T. C., Gutiérrez, R. A., Aguayo, F. I., Pacheco, A., García-Rojo, G., Aliaga, E., Rojas, P. S., Cidlowski, J. A., and Fiedler, J. L. 2018. MicroRNA Profiling and Bioinformatics Target Analysis in Dorsal Hippocampus of Chronically Stressed Rats: Relevance to Depression Pathophysiology. Front. Mol. Neurosci. 11:1–18  [Article]
  17. Nespolo, R., Gaitán-Espitia, J., Quintero-Galvis, J., Fernandez, F., Silva, A., Molina, C., Storey, K., and Bozinovic, F. 2018. A functional transcriptomics analysis in the relict marsupial Dromiciops gliroides reveals adaptive regulation of hibernation. Mol. Ecol. 10:1–3  [Article]
  18. Quintero-Galvis, J. F., Paleo-López, R., Solano-Iguaran, J. J., Poupin, M. J., Ledger, T., Gaitan- Espitia, J. D., Anto?, A., Travisano, M., and Nespolo, R. F. 2018. Exploring the evolution of multicellularity in Saccharomyces cerevisiae under bacteria environment: An experimental phylogenetics approach. Ecol. Evol. 8:4619–4630  [Article]
  19. Rojas-Aedo, J. F., Gil-Durán, C., Goity, A., Vaca, I., Levicán, G., Larrondo, L. F., and Chávez, R. 2018. The developmental regulator Pcz1 affects the production of secondary metabolites in the filamentous fungus Penicillium roqueforti. Microbiol. Res. 212–213:67–74  [Article]
  20. Salinas-Grenet, H., Herrera-Vásquez, A., Parra, S., Cortez, A., Gutiérrez, L., Pollmann, S., León, G., and Blanco-Herrera, F. 2018. Modulation of auxin levels in pollen grains affects stamen development and anther dehiscence in Arabidopsis. Int. J. Mol. Sci. 19:1–13  [Article]
  21. Salinas, F., Rojas, V., Delgado, V., López, J., Agosin, E., and Larrondo, L. F. 2018. Fungal Light-Oxygen-Voltage Domains for Optogenetic Control of Gene Expression and Flocculation in Yeast. MBio. 9:e00626-18  [Article]
  22. Tapia, S. M., Cuevas, M., Abarca, V., Delgado, V., Rojas, V., García, V., Brice, C., Martínez, C., Salinas, F., Larrondo, L. F., and Cubillos, F. A. 2018. GPD1 and ADH3 natural variants underlie glycerol yield differences in wine fermentation. Front. Microbiol. 9:1–13 [Article]
  23. Zúñiga, A., Fuente, F. D. La, Federici, F., Lionne, C., Bônnet, J., De Lorenzo, V., and González, B. 2018. An Engineered Device for Indoleacetic Acid Production under Quorum Sensing Signals Enables Cupriavidus pinatubonensis JMP134 to Stimulate Plant Growth. ACS Synth. Biol. 7:1519–1527 [Article]
  24. Fredes, I., Moreno, S., Diaz, F. P., and Gutierrez, R. A.2019. Nitrate signaling and the control of Arabidopsis growth and development. Curr. Opin. Plant Biol. 47:112–118 [Article]
  25. Kessi-Perez, E. I., Salinas, F.,Molinet, J., Gonzalez, A., Muniz, S., Guillamon, J. M., Hall, M. N., Larrondo, L. F., and Martinez, C. 2019. Indirect monitoring of TORC1 signalling pathway reveals molecular diversity among different yeast strains. Yeast. 36:65–74 [Article]

 

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