Publicaciones del Centro

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PUBLICACIONES DEL CENTRO

2021

        1. Ötvös K, Marconi M, Vega A, O’Brien J, Johnson A, Abualia R, Antonielli L, Montesinos JC, Zhang Y, Tan S, Cuesta C, Artner C, Bouguyon E, Gojon A, Friml J, Gutiérrez RA, Wabnik K, Benková E. Modulation of plant root growth by nitrogen source-defined regulation of polar auxin transport [Article]
        2. Vega A, Fredes I, O’Brien J, Shen Z, Ötvös K, Abualia R, Benkova E, Briggs SP, Gutiérrez RA. Nitrate triggered phosphoproteome changes and a PIN2 phosphosite modulating root system architecture [Article]
        3. Zárate, R. V, Arancibia, D., Fernández, A., Signorelli, J. R., Larrondo, L. F., Andrés, M. E., and Zamorano, P. Optimization of the Light-On system in a lentiviral platform to a light-controlled expression of genes in neurons. [Article]
        4. Eshel G, Araus V, Undurraga S, Soto DC, Moraga C, Montecinos A, Moyano T, Maldonado J, Díaz FP, Varala K, Nelson CW, Contreras-López O, Pal-Gabor H, Kraiser T, Carrasco-Puga G, Nilo-Poyanco R, Zegar CM, Orellana A, Montecino M, Maass A, Allende ML, DeSalle R, Stevenson DW, González M, Latorre C, Coruzzi GM, Gutiérrez RA. Plant ecological genomics at the limits of life in the Atacama Desert. [Article]
        5. González-Martín A, Moyano T, Gutiérrez DA, Carvajal FJ, Cerpa W, Hanley JG, Gutiérrez RA, Álvarez AR. c-Abl regulates a synaptic plasticity-related transcriptional program involved in memory and learning. [Article]
        6. Peña-Oyarzun D, Rodriguez-Peña M, Burgos-Bravo F, Vergara A, Kretschmar C, Sotomayor-Flores C, Ramirez-Sarmiento CA, De Smedt H, Reyes M, Perez W, Torres VA, Morselli E, Altamirano F, Wilson CAM, Hill JA, Lavandero S, Criollo A. PKD2/polycystin-2 induces autophagy by forming a complex with BECN1. [Article]
        7. Moyano TC, Gutiérrez RA, Alvarez JM. Genomic Footprinting Analyses from DNase-seq Data to Construct Gene Regulatory Networks. [Article]
        8. Villalobos P, Ramírez-Sarmiento CA, Babul J, Medina E. Human FoxP Transcription Factors as Tractable Models of the Evolution and Functional Outcomes of Three-Dimensional Domain Swapping. [Article]
        9. Galaz-Davison P, Román EA, Ramírez-Sarmiento CA. The N-terminal domain of RfaH plays an active role in protein fold-switching. [Article]
        10. Sonnendecker C, Oeser J, Richter PK, Hille P, Zhao Z, Fischer C, Lippold H, Blázquez-Sánchez P, Engelberger F, Ramírez-Sarmiento CA, Oeser T, Lihanova Y, Frank R, Jahnke HG, Billig S, Abel B, Sträter N, Matysik J, Zimmermann W. [Article]
        11. Engelberger, F., Galaz-Davison, P., Bravo, G., Rivera, M., and Ramírez-Sarmiento, C. A. Developing and Implementing Cloud-Based Tutorials That Combine Bioinformatics Software, Interactive Coding, and isualization Exercises for Distance Learning on Structural Bioinformatics. [Article]
        12. Figueroa D, Rojas V, Romero A, Larrondo LF, Salinas F. [Article]
        13. Romero, A., Rojas, V., Delgado, V., Salinas, F., and Larrondo, L. F. Modular and Molecular Optimization of a LOV (Light–Oxygen Voltage)-Based Optogenetic Switch in Yeast. [Article]
        14. Ruffel, S., Chaput, V., Przybyla-Toscano, J., Fayos, I., Ibarra, C., Moyano, T., Fizames, C., Tillard, P., O’Brien, J. A., Gutiérrez, R. A., Gojon, A., and Lejay, L. 2021. Genome-wide analysis in response to nitrogen and carbon identifies regulators for  root AtNRT2 transporters. Plant Physiol.  [Article]
        15. Dussarrat T, Decros G, Díaz FP, Gibon Y, Latorre C, Rolin D, Gutiérrez RA, Pétriacq P. Another Tale from the Harsh World: How Plants Adapt to Extreme Environments. [Article]
        16. Guajardo L, Aguilar R, Bustos FJ, Nardocci G, Gutiérrez RA, van Zundert B, Montecino M. Downregulation of the Polycomb-Associated Methyltransferase Ezh2 during Maturation of Hippocampal Neurons Is Mediated by MicroRNAs Let-7 and miR-124. [Article]
        17. Blázquez-Sánchez P, Engelberger F, Cifuentes-Anticevic J, Sonnendecker C, Griñén A, Reyes J, Díez B, Guixé V, Richter PK, Zimmermann W, Ramírez- Sarmiento CA. Antarctic polyester hydrolases degrade aliphatic and aromatic polyesters at moderate temperatures. [Article]
        18. Giroud, S., Habold, C., Nespolo, R. F., Mejías, C., Terrien, J., Logan, S. M., Henning, R. H., and Storey, K. B. 2020. The Torpid State: Recent Advances in Metabolic Adaptations and Protective  Mechanisms(†). Physiol. 11:623665 [Article]
        19. Villarreal P, Quintrel PA, Olivares-Muñoz S, Ruiz JJ, Nespolo RF, Cubillos FA. Identification of new ethanol-tolerant yeast strains with fermentation potential from central Patagonia. [Article]
        20. Quintero-Galvis JF, Saenz-Agudelo P, Celis-Diez JL, Amico GC, Vazquez S. The biogeography of Dromiciops in southern South America: Middle Miocene transgressions, speciation and associations with Nothofagus. [Article]
        21. Nespolo RF, Mejías C, Espinoza A, Quintero-Galvis J, Rezende EL, Fontúrbel FE, Bozinovic F. Heterothermy as the Norm, Homeothermy as the Exception: Variable Torpor Patterns in the South American Marsupial Monito del Monte (Dromiciops gliroides). [Article]
        22. Mardones, W., Villarroel, C. A., Abarca, V., Urbina, K., Peña, T. A., Molinet, J., Nespolo, R. F., and Cubillos, F. A. 2021. Rapid selection response to ethanol in Saccharomyces eubayanus emulates the  domestication process under brewing conditions. Microb. Biotechnol.  [Article]
        23. Mej??as, C., C. A. Castro-Pastene, H. Carrasco, J. F. Quintero-Galvis, M. Soto-Gamboa, F. Bozinovic, and R. F.Nespolo. Natural history of the relict marsupial Monito del Monte at the most extreme altitudinal and latitudinal location [Article]
        24. Olivares-Yañez C, Sánchez E, Pérez-Lara G, Seguel A, Camejo PY, Larrondo LF, Vidal EA, Canessa P. A comprehensive transcription factor and DNA-binding motif resource for the construction of gene regulatory networks in Botrytis cinerea and Trichoderma atroviride. [Article]
        25. Sabat P, Newsome SD, Pinochet S, Nespolo R, Sanchez-Hernandez JC, Maldonado K, Gerson AR, Sharp ZD, Whiteman JP. Triple Oxygen Isotope Measurements (?’17O) of Body WaterReflect Water Intake, Metabolism, and ?18O of Ingested Water in Passerines. [Article]
        26. Bekta?, A., Covington, M. F., Aidelberg, G., Arce, A., Matute, T., Núñez, I., Walsh, J., Boutboul, D., Delaugerre, C., Lindner, A. B., Federici, F., and Jayaprakash, A. D. 2021. Accessible LAMP-Enabled Rapid Test (ALERT) for Detecting SARS-CoV-2. Viruses. 13 [Article]
        27. Pacheco, J. M., Mansilla, N., Moison, M., Lucero, L., Gabarain, V. B., Ariel, F., and Estevez, J. M. 2021. The lncRNA APOLO and the transcription factor WRKY42 target common cell wall  EXTENSIN encoding genes to trigger root hair cell elongation. Plant Signal. Behav. :1920191 [Article]
        28. Pacheco JM, Canal MV, Pereyra CM, Welchen E, Martínez-Noël GMA, Estevez JM. The tip of the iceberg: emerging roles of TORC1, and its regulatory functions in plant cells. [Article]
        29. Eljebbawi A, Guerrero YDCR, Dunand C, Estevez JM. Highlighting reactive oxygen species as multitaskers in root development. [Article]
        30. Yáñez Feliú, G., Earle Gómez, B., Codoceo Berrocal, V., Muñoz Silva, M., Nuñez, I. N., Matute, T. F., Arce Medina, A., Vidal, G., Vidal Céspedes, C., Dahlin, J., Federici, F., and Rudge, T. J. 2021. Flapjack: Data Management and Analysis for Genetic Circuit Characterization. ACS Synth. Biol. 10:183–191  [Article]
        31. Arce A, Guzman Chavez F, Gandini C, Puig J, Matute T, Haseloff J, Dalchau N, Molloy J, Pardee K, Federici F. Decentralizing Cell-Free RNA Sensing With the Use of Low-Cost Cell Extracts. [Article]
        32. Moison, M., Pacheco, J. M., Lucero, L., Fonouni-Farde, C., Rodríguez-Melo, J., Mansilla, N., Christ, A., Bazin, J., Benhamed, M., Ibañez, F., Crespi, M., Estevez, J. M., and Ariel, F. 2021. The lncRNA APOLO interacts with the transcription factor WRKY42 to trigger root hair  cell expansion in response to cold. Mol. Plant. [Article]
        33. Casal JJ, Estevez JM. Auxin-Environment Integration in Growth Responses to Forage for Resources. [Article]
        34. Strasser, R., Seifert, G., Doblin, M. S., Johnson, K. L., Ruprecht, C., Pfrengle, F., Bacic, A., and Estevez, J. M. 2021. Cracking the “Sugar Code”: A Snapshot of N- and O-Glycosylation Pathways and  Functions in Plants Cells. Front. Plant Sci. 12:640919 [Article]
        35. Vago ME, Jaurena G, Estevez JM, Castro MA, Zavala JA, Ciancia M. Salt stress on Lotus tenuis triggers cell wall polysaccharide changes affecting their digestibility by ruminants. [Article]
        36. Pérez-Giménez, J., Iturralde, E. T., Torres Tejerizo, G., Quelas, J. I., Krol, E., Borassi, C., Becker, A., Estevez, J. M., and Lodeiro, A. R. 2021. A Stringent-Response-Defective Bradyrhizobium diazoefficiens Strain Does Not  Activate the Type 3 Secretion System, Elicits an Early Plant Defense Response, and Circumvents NH(4)NO(3)-Induced Inhibition of Nodulation. Appl. Environ. Microbiol. 87 [Article]
        37. Borassi C, Sede AR, Mecchia MA, Mangano S, Marzol E, Denita-Juarez SP, algado Salter JD, Velasquez SM, Muschietti JP, Estevez JM. Proline-rich extensin-like receptor kinases PERK5 and PERK12 are involved in pollen tube growth. [Article]
        38. Villarroel CA, Bastías M, Canessa P, Cubillos FA. Uncovering Divergence in Gene Expression Regulation in the Adaptation of Yeast to Nitrogen Scarcity. [Article]
        39. Del Campo A, Salamanca C, Fajardo A, Díaz-Castro F, Bustos C, Calfío C,
        40. Troncoso R, Pastene-Navarrete ER, Acuna-Castillo C, Milla LA, Villarroel CA, Cubillos FA, Aranda M, Rojo LE. Anthocyanins from Aristotelia chilensis Prevent Olanzapine-Induced Hepatic-Lipid Accumulation but Not Insulin Resistance in Skeletal Muscle Cells. [Article]
        41. Alvarez JM, Brooks MD, Swift J, Coruzzi GM. Time-Based Systems Biology Approaches to Capture and Model Dynamic Gene Regulatory Networks. [Article]
        42. Canales J, Verdejo J, Carrasco-Puga G, Castillo FM, Arenas-M A, Calderini DF. Transcriptome Analysis of Seed Weight Plasticity in Brassica Napus. [Article]
        43. Solís, J. L., Muth, J., Canales, J., Lizana, C., Pruefer, D., Riegel, R., and Behn, A. Allelic diversity of three anthocyanin synthesis genes inaccessions of native Solanum tuberosum L. ssp. tuberosum at the Potato Genebank of the Universidad Austral de Chile. [Article]
        44. Renau-Morata B, Molina R-V, Minguet EG, Cebolla-Cornejo J, Carrillo L, Martí R, García-Carpintero V, Jiménez-Benavente E, Yang L, Cañizares J, Canales J, Medina J, Nebauer SG. Integrative Transcriptomic and Metabolomic Analysis at Organ Scale Reveals Gene Modules Involved in the Responses to Suboptimal Nitrogen Supply in Tomato. [Article]
        45. Núñez-Lillo G, Ulloa-Zepeda L, Pavez C, Riveros A, Blanco-Herrera F, Campos-Vargas R, Pedreschi R, Meneses C. Unravelling the Molecular Regulation Mechanisms of Slow Ripening Trait in Prunus pérsica. [Article]
        46. Muñoz-Guzmán, F., Caballero, V., and Larrondo, L. F. 2021. A Global Search for novel Transcription Factors impacting the Neurospora crassa  Circadian Clock. G3 (Bethesda). [Article]
        47. Montecchiarini, M. L., Silva-Sanzana, C., Valderramo, L., Alemano, S., Gollán, A., Rivadeneira, M. F., Bello, F., Vázquez, D., Blanco-Herrera, F., Podestá, F. E., and Tripodi, K. E. J. Biochemical differences in the skin of two blueberries (Vaccinium corymbosum) varieties with contrasting firmness: Implication of ions, metabolites and cell wall related proteins in two developmental stages. [Article]
        48. Matute T., Nunez I., Rivera M., Reyes J., Blazquez-Sanchez P., Arce A., Brown AJ., Gandini Ch., Molloy J., Ramirez-Sarmiento CA*., and Fernán F*. Homebrew reagents for low cost RT-LAMP. [Article]
        49.  Di Genova A, Nardocci G, Maldonado-Agurto R, Hodar C, Valdivieso C, Morales P, Gajardo F, Marina R, Gutiérrez RA, Orellana A, Cambiazo V, Gonzalez M, Glavic A, Mendez MA, Maass A, Allende ML, Montecino MA. Genome sequencing and transcriptomic analysis of the Andean killifish Orestias ascotanensis reveals adaptation to high-altitude aquatic life. [Article]

2020

 

      1. hu, S., Martínez Pacheco, J., Estevez, J. M., and Yu, F. 2020. Autocrine regulation of root hair size by the RALF-FERONIA-RSL4 signaling pathway. New Phytol. 227:45–49 [Article]
      2. Swift, J., Alvarez, J. M., Araus, V., Gutiérrez, R. A., and Coruzzi, G. M. 2020. Nutrient dose-responsive transcriptome changes driven by Michaelis-Menten kinetics  underlie plant growth rates. Proc. Natl. Acad. Sci. U. S. A. 117:12531–12540 [Article]
      3. Villalobos-Cid, M., Salinas, F., Kessi-Pérez, E. I., De Chiara, M., Liti, G., Inostroza-Ponta, M., and Martínez, C. 2020. Comparison of phylogenetic tree topologies for nitrogen associated genes partially reconstruct the evolutionary history of saccharomyces cerevisiae. Microorganisms. [Article]
      4. Barrera, A., Hereme, R., Ruiz-Lara, S., Larrondo, L. F., Gundel, P. E., Pollmann, S., Molina-Montenegro, M. A., and Ramos, P. 2020. Fungal Endophytes Enhance the Photoprotective Mechanisms and Photochemical Efficiency in the Antarctic Colobanthus quitensis (Kunth) Bartl. Exposed to UV-B Radiation. Front. Ecol. Evol. [Article]
      5. Domínguez-Figueroa, J., Carrillo, L., Renau-Morata, B., Yang, L., Molina, R.-V., Marino, D., Canales, J., Weih, M., Vicente-Carbajosa, J., Nebauer, S. G., and Medina, J. 2020. The Arabidopsis Transcription Factor CDF3 Is Involved in Nitrogen Responses and Improves Nitrogen Use Efficiency in Tomato  . Front. Plant Sci.  . 11:1825[Article]
      6. Molinet, J., Salinas, F., Guillamón, J. M., and Martínez, C. 2020. GTR1 Affects Nitrogen Consumption and TORC1 Activity in Saccharomyces cerevisiae  Under Fermentation Conditions. Front. Genet. 11:519  [Article]
      7. Leiva-Ampuero, A., Agurto, M., Matus, J. T., Hoppe, G., Huidobro, C., Inostroza-Blancheteau, C., Reyes-Díaz, M., Stange, C., Canessa, P., and Vega, A. 2020. Salinity impairs photosynthetic capacity and enhances carotenoid-related gene  expression and biosynthesis in tomato (Solanum lycopersicum L. cv. Micro-Tom). PeerJ. 8:e9742 [Article]
      8. Herrera-Vásquez, A., Fonseca, A., Ugalde, J. M., Lamig, L., Seguel, A., Moyano, T. C., Gutiérrez, R. A., Salinas, P., Vidal, E. A., and Holuigue, L. 2020. TGA class II transcription factors are essential to restrict oxidative stress in response to UV-B stress in Arabidopsis. J. Exp. Bot. [Article]
      9. Sede, A. R., Wengier, D. L., Borassi, C., Estevez, J. M., and Muschietti, J. P. 2020. Imaging and Analysis of the Content of Callose, Pectin, and Cellulose in the Cell Wall of Arabidopsis Pollen Tubes Grown In Vitro BT  – Pollen and Pollen Tube Biology: Methods and Protocols. Pages 233–242 in: A. Geitmann, ed. Springer US, New York, NY. [Article]
      10. Mandakovic, D., Pulgar, R., Maldonado, J., Mardones, W., González, M., Cubillos, F. A., and Cambiazo, V. 2020. Fungal Diversity Analysis of Grape Musts from Central Valley-Chile and  Characterization of Potential New Starter Cultures. Microorganisms. 8 [Article]
      11. Moreno, S., Canales, J., Hong, L., Robinson, D., Roeder, A. H. K., and Gutiérrez, R. A. 2020. Nitrate Defines Shoot Size through Compensatory Roles for Endoreplication and Cell  Division in Arabidopsis thaliana. Curr. Biol. 30:1988-2000.e3 [Article]
      12. Brooks, M. D., Juang, C.-L., Katari, M. S., Alvarez, J. M., Pasquino, A., Shih, H.-J., Huang, J., Shanks, C., Cirrone, J., and Coruzzi, G. M. 2020. ConnecTF: A platform to integrate transcription factor-gene interactions and validate regulatory networks. Plant Physiol. [Article]
      13. Silva-Sanzana, C., Estevez, J. M., and Blanco-Herrera, F. 2020. Influence of cell wall polymers and their modifying enzymes during plant–aphid interactions. J. Exp. Bot. 71:3854–3864 [Article]
      14. Libkind, D., Peris, D., Cubillos, F. A., Steenwyk, J. L., Opulente, D. A., Langdon, Q. K., Rokas, A., and Hittinger, C. T. 2020. Into the wild: new yeast genomes from natural environments and new tools for their  analysis. FEMS Yeast Res. 20 [Article]
      15. Rezende, E. L., Bacigalupe, L. D., Nespolo, R. F., and Bozinovic, F. 2020. Shrinking dinosaurs and the evolution of endothermy in birds. Sci. Adv. 6:eaaw4486 [Article]
      16. Borassi, C., Gloazzo Dorosz, J., Ricardi, M. M., Carignani Sardoy, M., Pol Fachin, L., Marzol, E., Mangano, S., Rodríguez Garcia, D. R., Martínez Pacheco, J., Rondón Guerrero, Y. del C., Velasquez, S. M., Villavicencio, B., Ciancia, M., Seifert, G., Verli, H., and Estevez, J. M. 2020. A cell surface arabinogalactan-peptide influences root hair cell fate. New Phytol. 227:732–743 [Article]
      17. Vasquez-Montaño, E., Hoppe, G., Vega, A., Olivares-Yañez, C., and Canessa, P. 2020. Defects in the Ferroxidase That Participates in the Reductive Iron Assimilation  System Results in Hypervirulence in Botrytis Cinerea. MBio. 11 [Article]
      18. Figueroa, D., Rojas, V., Romero, A., Larrondo, L. F., and Salinas, F. 2020. The rise and shine of yeast optogenetics. Yeast. n/a [Article]
      19. Guajardo, L.; Aguilar, R.; Bustos, F.J.; Nardocci, G.; Gutiérrez, R.A.; van Zundert, B.; Montecino, M. 2020. Downregulation of the Polycomb-Associated  Methyltransferase Ezh2 during Maturation of Hippocampal Neurons Is Mediated by MicroRNAs Let-7 and miR-124. Int. J. Mol. Sci. 21 [Article]
      20. Vidal, E. A., Alvarez, J. M., Araus, V., Riveras, E., Brooks, M. D., Krouk, G., Ruffel, S., Lejay, L., Crawford, N. M., Coruzzi, G. M., and Gutiérrez, R. A. 2020. Nitrate in 2020: Thirty Years from Transport to Signaling Networks. Plant Cell. 32:2094–2119 [Article]
      21. Nespolo, R. F., Villarroel, C. A., Oporto, C. I., Tapia, S. M., Vega-Macaya, F., Urbina, K., De Chiara, M., Mozzachiodi, S., Mikhalev, E., Thompson, D., Larrondo, L. F., Saenz-Agudelo, P., Liti, G., and Cubillos, F. A. 2020. An Out-of-Patagonia migration explains the worldwide diversity and distribution of  Saccharomyces eubayanus lineages. PLoS Genet. 16:e1008777 [Article]
      22. Kessi-Pérez, E. I., Ponce, B., Li, J., Molinet, J., Baeza, C., Figueroa, D., Bastías, C., Gaete, M., Liti, G., Díaz-Barrera, A., Salinas, F., and Martínez, C. 2020. Differential Gene Expression and Allele Frequency Changes Favour Adaptation of a  Heterogeneous Yeast Population to Nitrogen-Limited Fermentations. Front. Microbiol. 11:1204 [Article]
      23. Riveras, E., Azocar, L., Moyano, T. C., Ocares, M., Molina, H., Romero, D., Roa, J. C., Valbuena, J. R., Gutiérrez, R. A., and Miquel, J. F. 2020. Transcriptomic profiles reveal differences in zinc metabolism, inflammation, and  tight junction proteins in duodenum from cholesterol gallstone subjects. Sci. Rep. 10:7448 [Article]
      24. Villalobos-Cid, M., Salinas, F., and Inostroza-Ponta, M. 2020. Total evidence or taxonomic congruence? A comparison of methods for combining biological evidence. J. Bioinform. Comput. Biol. 18:2050040  [Article]
      25. Carrasco-Puga, G., Díaz, F. P., Soto, D. C., Hernández-Castro, C., Contreras-López, O., Maldonado, A., Latorre, C., and Gutiérrez, R. A. 2020. Revealing hidden plant diversity in arid environments. Ecography (Cop.). n/a [Article]
      26. Urbina, K., Villarreal, P., Nespolo, R. F., Salazar, R., Santander, R., and Cubillos, F. A. 2020. Volatile Compound Screening Using HS-SPME-GC/MS on Saccharomyces eubayanus Strains  under Low-Temperature Pilsner Wort Fermentation. Microorganisms. 8 [Article]
      27. Mardones, W., Villarroel, C. A., Krogerus, K., Tapia, S. M., Urbina, K., Oporto, C. I., O’Donnell, S., Minebois, R., Nespolo, R., Fischer, G., Querol, A., Gibson, B., and Cubillos, F. A. 2020. Molecular profiling of beer wort fermentation diversity across natural Saccharomyces  eubayanus isolates. Microb. Biotechnol. 13:1012–1025 [Article]
      28. Molinet, J., and Cubillos, F. A. 2020. Wild Yeast for the Future: Exploring the Use of Wild Strains for Wine and Beer Fermentation  . Front. Genet.  . 11:1281  [Article]
      29. Pollak, B., Matute, T., Nuñez, I., Cerda, A., Lopez, C., Vargas, V., Kan, A., Bielinski, V., von Dassow, P., Dupont, C. L., and Federici, F. 2020. Universal loop assembly: open, efficient and cross-kingdom DNA fabrication. Synth. Biol. (Oxford, England). 5:ysaa001 [Article]
      30. Wozniak, A., Cerda, A., Ibarra-Henríquez, C., Sebastian, V., Armijo, G., Lamig, L., Miranda, C., Lagos, M., Solari, S., Guzmán, A. M., Quiroga, T., Hitschfeld, S., Riveras, E., Ferrés, M., Gutiérrez, R. A., and García, P. 2020. A simple RNA preparation method for SARS-CoV-2 detection by RT-qPCR. Sci. Rep. 10:16608 [Article]
      31. Medina, E., Villalobos, P., Hamilton, G. L., Komives, E. A., Sanabria, H., Ramírez-Sarmiento, C. A., and Babul, J. 2020. Intrinsically Disordered Regions of the DNA-Binding Domain of Human FoxP1 Facilitate  Domain Swapping. J. Mol. Biol. 432:5411–5429 [Article]
      32. Díaz, R. D., and Larrondo, L. F. 2020. A circadian clock in Neurospora crassa functions during plant cell wall  deconstruction. Fungal Biol. 124:501–508 [Article]
      33. Canales, J., Uribe, F., Henríquez-Valencia, C., Lovazzano, C., Medina, J., and Vidal, E. A. 2020. Transcriptomic analysis at organ and time scale reveals gene regulatory networks  controlling the sulfate starvation response of Solanum lycopersicum. BMC Plant Biol. 20:385 [Article]
      34. Nespolo, R. F., Solano-Iguaran, J. J., Paleo-López, R., Quintero-Galvis, J. F., Cubillos, F. A., and Bozinovic, F. 2020. Performance, genomic rearrangements, and signatures of adaptive evolution: Lessons  from fermentative yeasts. Ecol. Evol. 10:5240–5250 [Article]
      35. Devia, J., Bastías, C., Kessi-Pérez, E. I., Villarroel, C. A., De Chiara, M., Cubillos, F. A., Liti, G., Martínez, C., and Salinas, F. 2020. Transcriptional Activity and Protein Levels of Horizontally Acquired Genes in Yeast  Reveal Hallmarks of Adaptation to Fermentative Environments. Front. Genet. 11:293 [Article]
      36. Faktorová, D., Nisbet, R. E. R., Fernández Robledo, J. A., Casacuberta, E., Sudek, L., Allen, A. E., Ares, M. J., Aresté, C., Balestreri, C., Barbrook, A. C., Beardslee, P., Bender, S., Booth, D. S., Bouget, F.-Y., Bowler, C., Breglia, S. A., Brownlee, C., Burger, G., Cerutti, H., Cesaroni, R., Chiurillo, M. A., Clemente, T., Coles, D. B., Collier, J. L., Cooney, E. C., Coyne, K., Docampo, R., Dupont, C. L., Edgcomb, V., Einarsson, E., Elustondo, P. A., Federici, F., Freire-Beneitez, V., Freyria, N. J., Fukuda, K., García, P. A., Girguis, P. R., Gomaa, F., Gornik, S. G., Guo, J., Hampl, V., Hanawa, Y., Haro-Contreras, E. R., Hehenberger, E., Highfield, A., Hirakawa, Y., Hopes, A., Howe, C. J., Hu, I., Ibañez, J., Irwin, N. A. T., Ishii, Y., Janowicz, N. E., Jones, A. C., Kachale, A., Fujimura-Kamada, K., Kaur, B., Kaye, J. Z., Kazana, E., Keeling, P. J., King, N., Klobutcher, L. A., Lander, N., Lassadi, I., Li, Z., Lin, S., Lozano, J.-C., Luan, F., Maruyama, S., Matute, T., Miceli, C., Minagawa, J., Moosburner, M., Najle, S. R., Nanjappa, D., Nimmo, I. C., Noble, L., Novák Vanclová, A. M. G., Nowacki, M., Nuñez, I., Pain, A., Piersanti, A., Pucciarelli, S., Pyrih, J., Rest, J. S., Rius, M., Robertson, D., Ruaud, A., Ruiz-Trillo, I., Sigg, M. A., Silver, P. A., Slamovits, C. H., Jason Smith, G., Sprecher, B. N., Stern, R., Swart, E. C., Tsaousis, A. D., Tsypin, L., Turkewitz, A., Turnšek, J., Valach, M., Vergé, V., von Dassow, P., von der Haar, T., Waller, R. F., Wang, L., Wen, X., Wheeler, G., Woods, A., Zhang, H., Mock, T., Worden, A. Z., and Lukeš, J. 2020. Genetic tool development in marine protists: emerging model organisms for  experimental cell biology. Nat. Methods. 17:481–494 [Article]
      37. Rojas V., Salinas F., Guzman-Zamora L., Romero A., Delgado V., L. L. . 2020. 12 Exploiting Fungal Photobiology as a Source of Novel Bio-blocks for Optogenetic Systems. in: Benz J.P., Schipper K. (eds) Genetics and Biotechnology. The Mycota (A Comprehensive Treatise on Fungi as Experimental Systems for Basic and Applied Research), [Article]
      38. Pérez-Palma, E., Bustos, B. I., Lal, D., Buch, S., Azocar, L., Toliat, M. R., Lieb, W., Franke, A., Hinz, S., Burmeister, G., von Shönfels, W., Schafmayer, C., Ahnert, P., Völzke, H., Völker, U., Homuth, G., Lerch, M. M., Puschel, K., Gutiérrez, R. A., Hampe, J., Nürnberg, P., Miquel, J. F., and De Ferrari, G. V. 2020. Copy number variants in lipid metabolism genes are associated with gallstones  disease in men. Eur. J. Hum. Genet. 28:264–273 [Article]
      39. Li, L., Li, B., Xie, C., Zhang, T., Borassi, C., Estevez, J. M., Li, X., and Liu, X. 2020. Arabidopsis RAD23B regulates pollen development by mediating degradation of KRP1. J. Exp. Bot. 71:4010–4019 [Article]
      40. Zúñiga, L. M., Andrade, J., Fábrega-Guerén, F., Orihuela, P. A., Velasquez, E. V, Vidal, E. A., Gutiérrez, R. A., Morales, P., Gómez-Silva, B., and Croxatto, H. B. Mating induces early transcriptional response in the rat endosalpinx: The role of TNF and RA. Reproduction. :REP-20-0190 [Article]

2019

 

      1. Naulin, P. A., Armijo, G. I., Vega, A. S., Tamayo, K. P., Gras, D. E., de la Cruz, J., and Gutiérrez, R. A. 2020. Nitrate Induction of Primary Root Growth Requires Cytokinin Signaling in Arabidopsis  thaliana. Plant Cell Physiol. 61:342–352 [Article]
      2. Fernandez-Gomez, B., Maldonado, J., Mandakovic, D., Gaete, A., Gutierrez, R. A., Maass, A., Cambiazo, V., and Gonzalez, M. 2019. Bacterial communities associated to Chilean altiplanic native plants from the Andean grasslands soils. Sci. Rep. 9:1042 [Article]
      3. Kessi-Perez, E. I., Salinas, F., Molinet, J., Gonzalez, A., Muniz, S., Guillamon, J. M., Hall, M. N., Larrondo, L. F., and Martinez, C. 2019. Indirect monitoring of TORC1 signalling pathway reveals molecular diversity among different yeast strains. Yeast. 36:65–74 [Article]
      4. Oporto, C. I., Villarroel, C. A., Tapia, S. M., Garcia, V., and Cubillos, F. A. 2019. Distinct Transcriptional Changes in Response to Patulin Underlie Toxin Biosorption Differences in Saccharomyces Cerevisiae. Toxins (Basel). 11 [Article]
      5. Cruz, N., Méndez, T., Ramos, P., Urbina, D., Vega, A., Gutiérrez, R. A., Moya-León, M. A., and Herrera, R. 2019. Induction of PrMADS10 on the lower side of bent pine tree stems: potential role in modifying plant cell wall properties and wood anatomy. Sci. Rep. 9:18981 [Article]
      6. Vega, A., O’Brien, J. A., and Gutiérrez, R. A. 2019. Nitrate and hormonal signaling crosstalk for plant growth and development. Curr. Opin. Plant Biol. 52:155–163 [Article]
      7. Horta, M. A. C., Thieme, N., Gao, Y., Burnum-Johnson, K. E., Nicora, C. D., Gritsenko, M. A., Lipton, M. S., Mohanraj, K., de Assis, L. J., Lin, L., Tian, C., Braus, G. H., Borkovich, K. A., Schmoll, M., Larrondo, L. F., Samal, A., Goldman, G. H., and Benz, J. P. 2019. Broad Substrate-Specific Phosphorylation Events Are Associated With the Initial  Stage of Plant Cell Wall Recognition in Neurospora crassa. Front. Microbiol. 10:2317 [Article]
      8. Wood, J. R., Díaz, F. P., Latorre, C., Wilmshurst, J. M., Burge, O. R., González, F., and Gutiérrez, R. A. 2019. Ancient parasite DNA from late Quaternary Atacama Desert rodent middens. Quat. Sci. Rev. 226:106031 [Article]
      9. Villalobos-Cid, M., Salinas, F., Kessi-Pérez, E. I., De Chiara, M., Liti, G., Inostroza-Ponta, M., and Martínez, C. 2019. Comparison of Phylogenetic Tree Topologies for Nitrogen Associated Genes Partially  Reconstruct the Evolutionary History of Saccharomyces cerevisiae. Microorganisms. 8 [Article]
      10. Sabat, P., Bozinovic, F., Contreras-Ramos, C., Nespolo, R. F., Newsome, S. D., Quirici, V., Maldonado, K., Peña-Villalobos, I., Ramirez-Otarola, N., and Sanchez-Hernandez, J. C. 2019. The interplay between ambient temperature and salt intake affects oxidative status  and immune responses in a ubiquitous Neotropical passerine, the rufous-collared sparrow. Comp. Biochem. Physiol. A. Mol. Integr. Physiol. 234:50–59 [Article]
      11. Silva-Sanzana, C., Estevez, J. M., and Blanco-Herrera, F. 2019. Influence of cell wall polymers and their modifying enzymes during plant-aphid interactions. J. Exp. Bot. [Article]
      12. Nuñez-Lillo, G., Balladares, C., Pavez, C., Urra, C., Sanhueza, D., Vendramin, E., Dettori, M. T., Arús, P., Verde, I., Blanco-Herrera, F., Campos-Vargas, R., and Meneses, C. 2019. High-density genetic map and QTL analysis of soluble solid content, maturity date, and mealiness in peach using genotyping by sequencing. Sci. Hortic. (Amsterdam). 257:108734 [Article]
      13. Silva-Sanzana, C., Celiz-Balboa, J., Garzo, E., Marcus, S. E., Parra-Rojas, J. P., Rojas, B., Olmedo, P., Rubilar Romero, M. A., Rios, I., Chorbadjian, R. A., Fereres, A., Knox, J. P., Saez-Aguayo, S., and Blanco-Herrera, F. 2019.  Pectinmethyesterases Modulate Plant Homogalacturonan Status in Defenses Against the Aphid Myzus persicae. Plant Cell. [Article]
      14. Pollak, B., Cerda, A., Delmans, M., Alamos, S., Moyano, T., West, A., Gutierrez, R. A., Patron, N. J., Federici, F., and Haseloff, J. 2019. Loop assembly: a simple and open system for recursive fabrication of DNA circuits. New Phytol. 222:628–640 [Article]
      15. Brooks, M. D., Cirrone, J., Pasquino, A. V, Alvarez, J. M., Swift, J., Mittal, S., Juang, C.-L., Varala, K., Gutierrez, R. A., Krouk, G., Shasha, D., and Coruzzi, G. M. 2019. Network Walking charts transcriptional dynamics of nitrogen signaling by integrating validated and predicted genome-wide interactions. Nat. Commun. 10:1569 [Article]
      16. Falter-Braun, P., Brady, S., Gutierrez, R. A., Coruzzi, G. M., and Krouk, G. 2019. iPlant Systems Biology (iPSB): An International Network Hub in the Plant Community. Mol. Plant. 12:727–730 [Article]
      17. Alvarez, J. M., Moyano, T. C., Zhang, T., Gras, D. E., Herrera, F. J., Araus, V., O’Brien, J. A., Carrillo, L., Medina, J., Vicente-Carbajosa, J., Jiang, J., and Gutiérrez, R. A. 2019. Local changes in chromatin accessibility and transcriptional networks underlying the nitrate response in Arabidopsis roots. Mol. Plant. [Article]
      18. Fredes, I., Moreno, S., Diaz, F. P., and Gutierrez, R. A. 2019. Nitrate signaling and the control of Arabidopsis growth and development. Curr. Opin. Plant Biol. 47:112–118 [Article]
      19. Pérez-Palma, E., Bustos, B. I., Lal, D., Buch, S., Azocar, L., Toliat, M. R., Lieb, W., Franke, A., Hinz, S., Burmeister, G., von Shönfels, W., Schafmayer, C., Ahnert, P., Völzke, H., Völker, U., Homuth, G., Lerch, M. M., Puschel, K., Gutiérrez, R. A., Hampe, J., Nürnberg, P., Francisco Miquel, J., and De Ferrari, G. V. 2019. Copy number variants in lipid metabolism genes are associated with gallstones disease in men. Eur. J. Hum. Genet. [Article]
      20. Bustos, B. I., Perez-Palma, E., Buch, S., Azocar, L., Riveras, E., Ugarte, G. D., Toliat, M., Nurnberg, P., Lieb, W., Franke, A., Hinz, S., Burmeister, G., von Schonfels, W., Schafmayer, C., Volzke, H., Volker, U., Homuth, G., Lerch, M. M., Santos, J. L., Puschel, K., Bambs, C., Roa, J. C., Gutierrez, R. A., Hampe, J., De Ferrari, G. V, and Miquel, J. F. 2019. Variants in ABCG8 and TRAF3 genes confer risk for gallstone disease in admixed Latinos with Mapuche Native American ancestry. Sci. Rep. 9:772 [Article]
      21. Vidal, E. A., Moyano, T. C., Bustos, B. I., Perez-Palma, E., Moraga, C., Riveras, E., Montecinos, A., Azocar, L., Soto, D. C., Vidal, M., Di Genova, A., Puschel, K., Nurnberg, P., Buch, S., Hampe, J., Allende, M. L., Cambiazo, V., Gonzalez, M., Hodar, C., Montecino, M., Munoz-Espinoza, C., Orellana, A., Reyes-Jara, A., Travisany, D., Vizoso, P., Moraga, M., Eyheramendy, S., Maass, A., De Ferrari, G. V, Miquel, J. F., and Gutierrez, R. A. 2019. Whole Genome Sequence, Variant Discovery and Annotation in Mapuche-Huilliche Native South Americans. Sci. Rep. 9:2132 [Article]
      22. Ramírez-Cáceres, G. E., Moya-Hernández, M. G., Quilodrán, M., Nespolo, R. F., Ceballos, R., Villagra, C. A., and Ramírez, C. C. 2019. Harbouring the secondary endosymbiont Regiella insecticola increases predation risk and reproduction in the cereal aphid Sitobion avenae. J. Pest Sci. (2004). 92:1039–1047 [Article]
      23. Molinet, J., Cubillos, F. A., Salinas, F., Liti, G., and Martinez, C. 2019. Genetic variants of TORC1 signaling pathway affect nitrogen consumption in Saccharomyces cerevisiae during alcoholic fermentation. PLoS One. 14:e0220515 [Article]
      24. Kessi-Pérez, E. I., Salinas, F., González, A., Su, Y., Guillamón, J. M., Hall, M. N., Larrondo, L. F., and Martínez, C. 2019. KAE1 Allelic Variants Affect TORC1 Activation and Fermentation Kinetics in Saccharomyces cerevisiae  . Front. Microbiol.  . 10:1686 [Article]
      25. Diaz, F. P., Latorre, C., Carrasco-Puga, G., Wood, J. R., Wilmshurst, J. M., Soto, D. C., Cole, T. L., and Gutierrez, R. A. 2019. Multiscale climate change impacts on plant diversity in the Atacama Desert. Glob. Chang. Biol. 25:1733–1745 [Article]
      26. Salazar, M. P., Valenzuela, D., Tironi, M., and Gutiérrez, R. A. 2019. The ambivalent regulator: the construction of a regulatory style for genetically modified crops in Chile. Tapuya Lat. Am. Sci. Technol. Soc. 0:1–21 [Article]
      27. Cubillos, F. A., Gibson, B., Grijalva-Vallejos, N., Krogerus, K., and Nikulin, J. 2019. Bioprospecting for brewers: Exploiting natural diversity for naturally diverse beers. Yeast. [Article]
      28. Mandakovic, D., Rojas, C., Maldonado, J., Latorre, M., Travisany, D., Delage, E., and … 2018. Structure and co-occurrence patterns in microbial communities under acute environmental stress reveal ecological factors fostering resilience. Sci. Rep. 8:5875 [Article]
      29. Castillo, F. M., Canales, J., Claude, A., and Calderini, D. F. 2018. Expansin genes expression in growing ovaries and grains of sunflower are tissue-specific and associate with final grain weight. BMC Plant Biol. 18:327 [Article]
      30. Pollak, B., Cerda, A., Delmans, M., Álamos, S., Moyano, T., West, A., Gutiérrez, R. A., Patron, N., Federici, F., and Haseloff, J. 2018. Loop Assembly: a simple and open system for recursive fabrication of DNA circuits. bioRxiv. :247593[Article]
      31. Wood, J. R., Diaz, F. P., Latorre, C., Wilmshurst, J. M., Burge, O. R., and Gutierrez, R. A. 2018. Plant pathogen responses to Late Pleistocene and Holocene climate change in the central Atacama Desert, Chile. Sci. Rep. 8:17208 [Article]
      32. Nespolo, R., Gaitán-Espitia, J., Quintero-Galvis, J., Fernandez, F., Silva, A., Molina, C., Storey, K., and Bozinovic, F. 2018. A functional transcriptomics analysis in the relict marsupial Dromiciops gliroides reveals adaptive regulation of hibernation. Mol. Ecol. 10:1–3 [Article]
      33. Canales, J., Henriquez-Valencia, C., and Brauchi, S. 2018. The Integration of Electrical Signals Originating in the Root of Vascular Plants. Front. Plant Sci. 8 [Article]
      34. Rojas-Aedo, J. F., Gil-Durán, C., Goity, A., Vaca, I., Levicán, G., Larrondo, L. F., and Chávez, R. 2018. The developmental regulator Pcz1 affects the production of secondary metabolites in the filamentous fungus Penicillium roqueforti. Microbiol. Res. 212–213:67–74 [Article]
      35. Larrondo, L., and Canessa, P. 2018. The Clock Keeps on Ticking: Emerging Roles for Circadian Regulation in the Control of Fungal Physiology and Pathogenesis Luis. in: Current Topics in Microbiology and Immunology, Khan, A., Montenegro-Montero, A., and Mathelier, A. 2018. Put science first and formatting later. EMBO Rep. 19 [Article]
      36. Kan, A., Del Valle, I., Rudge, T., Federici, F., and Haseloff, J. 2018. Intercellular adhesion promotes clonal mixing in growing bacterial populations. J. R. Soc. Interface. 15:20180406 [Article]
      37. Arraño-Salinas, P., Domínguez-Figueroa, J., Herrera-Vásquez, A., Zavala, D., Medina, J., Vicente-Carbajosa, J., Meneses, C., Canessa, P., Moreno, A. A., and Blanco-Herrera, F. 2018. WRKY7, -11 and -17 transcription factors are modulators of the bZIP28 branch of the unfolded protein response during PAMP-triggered immunity in Arabidopsis thaliana. Plant Sci. :0–1 [Article]
      38. Contreras-López, O., Moyano, T. C., Soto, D. C., and Gutiérrez, R. A. 2018. Step-by-step construction of gene co-expression networks from high-throughput Arabidopsis RNA sequencing data. Methods Mol. Biol. 1761:275–301 [Article]
      39. Henríquez-Valencia, C., Arenas-M, A., Medina, J., and Canales, J. 2018. Integrative Transcriptomic Analysis Uncovers Novel Gene Modules That Underlie the Sulfate Response in Arabidopsis thaliana. Front. Plant Sci. 9:1–20[Article]
      40. Salinas-Grenet, H., Herrera-Vásquez, A., Parra, S., Cortez, A., Gutiérrez, L., Pollmann, S., León, G., and Blanco-Herrera, F. 2018. Modulation of auxin levels in pollen grains affects stamen development and anther dehiscence in Arabidopsis. Int. J. Mol. Sci. 19:1–13 [Article]
      41. Quintero-Galvis, J. F., Paleo-López, R., Solano-Iguaran, J. J., Poupin, M. J., Ledger, T., Gaitan-Espitia, J. D., Anto?, A., Travisano, M., and Nespolo, R. F. 2018. Exploring the evolution of multicellularity in Saccharomyces cerevisiae under bacteria environment: An experimental phylogenetics approach. Ecol. Evol. 8:4619–4630 [Article]
      42. Brice, C., Cubillos, F. A., Dequin, S., Camarasa, C., and Martinez, C. 2018. Adaptability of the Saccharomyces cerevisiae yeasts to wine fermentation conditions relies on their strong ability to consume nitrogen. PLoS One. 13:e0192383 [Article]
      43. Zúñiga, A., Fuente, F. D. La, Federici, F., Lionne, C., Bônnet, J., De Lorenzo, V., and González, B. 2018. An Engineered Device for Indoleacetic Acid Production under Quorum Sensing Signals Enables Cupriavidus pinatubonensis JMP134 to Stimulate Plant Growth. ACS Synth. Biol. 7:1519–1527 [Article]
      44. Kessi-Pérez, E. I., Salinas, F., Molinet, J., González, A., Muñiz, S., Guillamón, J. M., Hall, M. N., Larrondo, L. F., and Martínez, C. 2018. Indirect monitoring of TORC1 signalling pathway reveals molecular diversity among different yeast strains. Yeast. [Article]
      45. Nespolo, R. F., Gaitan-Espitia, J. D., Quintero-Galvis, J. F., Fernandez, F. V, Silva, A. X., Molina, C., Storey, K. B., and Bozinovic, F. 2018. A functional transcriptomic analysis in the relict marsupial Dromiciops gliroides reveals adaptive regulation of protective functions during hibernation. Mol. Ecol. 27:4489–4500 [Article]
      46. Boni, A. C., Ambrósio, D. L., Cupertino, F. B., Montenegro-Montero, A., Virgilio, S., Freitas, F. Z., Corrocher, F. A., Gonçalves, R. D., Yang, A., Weirauch, M. T., Hughes, T. R., Larrondo, L. F., and Bertolini, M. C. 2018. Neurospora crassa developmental control mediated by the FLB-3 transcription factor. Fungal Biol. 122:570–582 [Article]
      47. Salinas, F., Rojas, V., Delgado, V., López, J., Agosin, E., and Larrondo, L. F. 2018. Fungal Light-Oxygen-Voltage Domains for Optogenetic Control of Gene Expression and Flocculation in Yeast. MBio. 9:e00626-18 [Article]
      48. Muñoz-Llanos, M., García-Pérez, M. A., Xu, X., Tejos-Bravo, M., Vidal, E. A., Moyano, T. C., Gutiérrez, R. A., Aguayo, F. I., Pacheco, A., García-Rojo, G., Aliaga, E., Rojas, P. S., Cidlowski, J. A., and Fiedler, J. L. 2018.  MicroRNA Profiling and Bioinformatics Target Analysis in Dorsal Hippocampus of Chronically Stressed Rats: Relevance to Depression Pathophysiology. Front. Mol. Neurosci. 11:1–18 [Article]
      49. Cifuentes-Esquivel, N., Celiz-Balboa, J., Henriquez-Valencia, C., Mitina, I., Arraño-Salinas, P., Moreno, A. A., Meneses, C., Blanco-Herrera, F., and Orellana, A. 2018. bZIP17 regulates the expression of genes related to seed storage and germination, reducing seed susceptibility to osmotic stress. J. Cell. Biochem. 119:6857–6868 [Article]
      50. Tapia, S. M., Cuevas, M., Abarca, V., Delgado, V., Rojas, V., García, V., Brice, C., Martínez, C., Salinas, F., Larrondo, L. F., and Cubillos, F. A. 2018. GPD1 and ADH3 natural variants underlie glycerol yield differences in wine fermentation. Front. Microbiol. 9:1–13 [Article]
      51. Canales, J., Henriquez-Valencia, C., and Brauchi, S. 2017. The Integration of Electrical Signals Originating in the Root of Vascular Plants. Front. Plant Sci. 8:2173 [Article]

2018

      1. Mandakovic, D., Rojas, C., Maldonado, J., Latorre, M., Travisany, D., Delage, E., and … 2018. Structure and co-occurrence patterns in microbial communities under acute environmental stress reveal ecological factors fostering resilience. Sci. Rep. 8:5875 [Article]
      2. Castillo, F. M., Canales, J., Claude, A., and Calderini, D. F. 2018. Expansin genes expression in growing ovaries and grains of sunflower are tissue-specific and associate with final grain weight. BMC Plant Biol. 18:327 [Article]
      3. Pollak, B., Cerda, A., Delmans, M., Álamos, S., Moyano, T., West, A., Gutiérrez, R. A., Patron, N., Federici, F., and Haseloff, J. 2018. Loop Assembly: a simple and open system for recursive fabrication of DNA circuits. bioRxiv. :247593 [Article]
      4. Wood, J. R., Diaz, F. P., Latorre, C., Wilmshurst, J. M., Burge, O. R., and Gutierrez, R. A. 2018. Plant pathogen responses to Late Pleistocene and Holocene climate change in the central Atacama Desert, Chile. Sci. Rep. 8:17208 [Article]
      5. Nespolo, R., Gaitán-Espitia, J., Quintero-Galvis, J., Fernandez, F., Silva, A., Molina, C., Storey, K., and ozinovic, F. 2018. A functional transcriptomics analysis in the relict marsupial Dromiciops gliroides reveals adaptive regulation of hibernation. Mol. Ecol. 10:1–3 [Article]
      6. Canales, J., Henriquez-Valencia, C., and Brauchi, S. 2018. The Integration of Electrical Signals Originating in the Root of Vascular Plants. Front. Plant Sci. 8 [Article]
      7. Rojas-Aedo, J. F., Gil-Durán, C., Goity, A., Vaca, I., Levicán, G., Larrondo, L. F., and Chávez, R. 2018. The developmental regulator Pcz1 affects the production of secondary metabolites in the filamentous fungus Penicillium roqueforti. Microbiol. Res. 212–213:67–74 [Article]
      8. Larrondo, L., and Canessa, P. 2018. The Clock Keeps on Ticking: Emerging Roles for Circadian Regulation in the Control of Fungal Physiology and Pathogenesis Luis. in: Current Topics in Microbiology and Immunology [Article]
      9.  Khan, A., Montenegro-Montero, A., and Mathelier, A. 2018. Put science first and formatting later. EMBO Rep. 19 [Article]
      10. Kan, A., Del Valle, I., Rudge, T., Federici, F., and Haseloff, J. 2018. Intercellular adhesion promotes clonal mixing in growing bacterial populations. J. R. Soc. Interface. 15:20180406 [Article]
      11. Arraño-Salinas, P., Domínguez-Figueroa, J., Herrera-Vásquez, A., Zavala, D., Medina, J., Vicente-Carbajosa, J., Meneses, C., Canessa, P., Moreno, A. A., and Blanco-Herrera, F. 2018. WRKY7, -11 and -17 transcription factors are modulators of the bZIP28 branch of the unfolded protein response during PAMP-triggered immunity in Arabidopsis thaliana. Plant Sci. :0–1 [Article]
      12. Contreras-López, O., Moyano, T. C., Soto, D. C., and Gutiérrez, R. A. 2018. Step-by-step construction of gene co-expression networks from high-throughput Arabidopsis RNA sequencing data. Methods Mol. Biol. 1761:275–301 [Article]
      13. Henríquez-Valencia, C., Arenas-M, A., Medina, J., and Canales, J. 2018. Integrative Transcriptomic Analysis Uncovers Novel Gene Modules That Underlie the Sulfate Response in Arabidopsis thaliana. Front. Plant Sci. 9:1–20 [Article]
      14. Salinas-Grenet, H., Herrera-Vásquez, A., Parra, S., Cortez, A., Gutiérrez, L., Pollmann, S., León, G., and Blanco-Herrera, F. 2018. Modulation of auxin levels in pollen grains affects stamen development and anther dehiscence in Arabidopsis. Int. J. Mol. Sci. 19:1–13 [Article]
      15. Quintero-Galvis, J. F., Paleo-López, R., Solano-Iguaran, J. J., Poupin, M. J., Ledger, T., Gaitan-Espitia, J. D., Anto?, A., Travisano, M., and Nespolo, R. F. 2018. Exploring the evolution of multicellularity in Saccharomyces cerevisiae under bacteria environment: An experimental phylogenetics approach. Ecol. Evol. 8:4619–4630 [Article]
      16. Brice, C., Cubillos, F. A., Dequin, S., Camarasa, C., and Martinez, C. 2018. Adaptability of the Saccharomyces cerevisiae yeasts to wine fermentation conditions relies on their strong ability to consume nitrogen. PLoS One. 13:e0192383[Article]
      17. Zúñiga, A., Fuente, F. D. La, Federici, F., Lionne, C., Bônnet, J., De Lorenzo, V., and González, B. 2018. An Engineered Device for Indoleacetic Acid Production under Quorum Sensing Signals Enables Cupriavidus pinatubonensis JMP134 to Stimulate Plant Growth. ACS Synth. Biol. 7:1519–1527 [Article]
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